Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.43□□□□□ -0.26
Rprd1aQ8VDS4 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.43□□□□□ -0.26
Rprd1aQ8VDS4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rprd1aQ8VDS4 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rprd1aQ8VDS4 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rprd1aQ8VDS4 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rprd1aQ8VDS4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rprd1aQ8VDS4 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rprd1aQ8VDS4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rprd1aQ8VDS4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rprd1aQ8VDS4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.43□□□□□ -0.26
Rprd1aQ8VDS4 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rprd1aQ8VDS4 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rprd1aQ8VDS4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rprd1aQ8VDS4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Gm12384-201ENSMUST00000119228 919 ntBASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rprd1aQ8VDS4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Grk6-205ENSMUST00000224653 2976 ntBASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Gm1335-201ENSMUST00000121653 386 ntBASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Gm2231-201ENSMUST00000125661 612 ntBASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rprd1aQ8VDS4 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.4□□□□□ -0.26
Rprd1aQ8VDS4 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rprd1aQ8VDS4 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.4□□□□□ -0.26
Rprd1aQ8VDS4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rprd1aQ8VDS4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms