Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Gm27390-201ENSMUST00000184516 176 ntBASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc9Q8VC31 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Gm10275-202ENSMUST00000168697 495 ntBASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Gm44913-201ENSMUST00000208060 2990 ntBASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Gm45747-201ENSMUST00000212203 999 ntBASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Gm10275-201ENSMUST00000092620 635 ntBASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Gm45677-201ENSMUST00000209975 1341 ntBASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc9Q8VC31 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc9Q8VC31 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.61■□□□□ 0.09
Ccdc9Q8VC31 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms