Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.62□□□□□ -0.07
Ushbp1Q8R370 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ushbp1Q8R370 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ushbp1Q8R370 Rubie-203ENSMUST00000227803 2430 ntBASIC14.62□□□□□ -0.07
Ushbp1Q8R370 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Gm16177-201ENSMUST00000120728 718 ntBASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Gm18054-201ENSMUST00000207539 555 ntBASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ushbp1Q8R370 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.6□□□□□ -0.07
Ushbp1Q8R370 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Gm5687-201ENSMUST00000118252 640 ntBASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Gm11803-201ENSMUST00000119966 444 ntBASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Itm2b-204ENSMUST00000228637 783 ntBASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Gm9823-201ENSMUST00000051212 327 ntBASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ushbp1Q8R370 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ushbp1Q8R370 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms