Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cchcr1Q8K2I2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Gm14350-201ENSMUST00000116642 640 ntBASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cchcr1Q8K2I2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Gm7488-201ENSMUST00000117148 684 ntBASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Gm12859-201ENSMUST00000117834 427 ntBASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Gm6152-201ENSMUST00000151704 340 ntBASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Mir6977-201ENSMUST00000184960 64 ntBASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Gm18473-201ENSMUST00000220543 868 ntBASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Gm15823-201ENSMUST00000064305 670 ntBASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cchcr1Q8K2I2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Gm27437-201ENSMUST00000183429 107 ntBASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cchcr1Q8K2I2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms