Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Hmgcs1Q8JZK9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hmgcs1Q8JZK9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmgcs1Q8JZK9 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgcs1Q8JZK9 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Gm15371-201ENSMUST00000117057 784 ntBASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Gm2423-201ENSMUST00000074863 733 ntBASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgcs1Q8JZK9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 Gm6983-201ENSMUST00000214912 628 ntBASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Hmgcs1Q8JZK9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms