Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfwd3Q8CIK8 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rfwd3Q8CIK8 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rfwd3Q8CIK8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rfwd3Q8CIK8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rfwd3Q8CIK8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rfwd3Q8CIK8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rfwd3Q8CIK8 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.27□□□□□ -0.44
Rfwd3Q8CIK8 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rfwd3Q8CIK8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Rfwd3Q8CIK8 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rfwd3Q8CIK8 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Rfwd3Q8CIK8 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Rfwd3Q8CIK8 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Rfwd3Q8CIK8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rfwd3Q8CIK8 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Gm14350-201ENSMUST00000116642 640 ntBASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Proscos-202ENSMUST00000178990 666 ntBASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Gm24196-201ENSMUST00000179161 110 ntBASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Gm8652-201ENSMUST00000181363 964 ntBASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Gm16372-201ENSMUST00000073088 450 ntBASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rfwd3Q8CIK8 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rfwd3Q8CIK8 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.25□□□□□ -0.45
Rfwd3Q8CIK8 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms