Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.61□□□□□ -0.55
ShfQ8CG80 Gm44397-201ENSMUST00000195950 113 ntBASIC11.61□□□□□ -0.55
ShfQ8CG80 Gm44872-201ENSMUST00000207864 420 ntBASIC11.61□□□□□ -0.55
ShfQ8CG80 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.61□□□□□ -0.55
ShfQ8CG80 Gm7730-201ENSMUST00000212486 454 ntBASIC11.61□□□□□ -0.55
ShfQ8CG80 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.61□□□□□ -0.55
ShfQ8CG80 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.61□□□□□ -0.55
ShfQ8CG80 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.61□□□□□ -0.55
ShfQ8CG80 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.61□□□□□ -0.55
ShfQ8CG80 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
ShfQ8CG80 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.61□□□□□ -0.55
ShfQ8CG80 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ShfQ8CG80 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.6□□□□□ -0.55
ShfQ8CG80 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
ShfQ8CG80 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
ShfQ8CG80 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.6□□□□□ -0.55
ShfQ8CG80 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Gm14350-201ENSMUST00000116642 640 ntBASIC11.6□□□□□ -0.55
ShfQ8CG80 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.6□□□□□ -0.55
ShfQ8CG80 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
ShfQ8CG80 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
ShfQ8CG80 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
ShfQ8CG80 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
ShfQ8CG80 Gm42612-201ENSMUST00000197986 623 ntBASIC11.6□□□□□ -0.55
ShfQ8CG80 Gm43170-201ENSMUST00000199827 612 ntBASIC11.6□□□□□ -0.55
ShfQ8CG80 Gm6983-201ENSMUST00000214912 628 ntBASIC11.6□□□□□ -0.55
ShfQ8CG80 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.6□□□□□ -0.55
ShfQ8CG80 Itm2b-204ENSMUST00000228637 783 ntBASIC11.6□□□□□ -0.55
ShfQ8CG80 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
ShfQ8CG80 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
ShfQ8CG80 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
ShfQ8CG80 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
ShfQ8CG80 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ShfQ8CG80 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
ShfQ8CG80 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
ShfQ8CG80 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
ShfQ8CG80 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ShfQ8CG80 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms