Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.09■□□□□ 0.17
Smc5Q8CG46 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smc5Q8CG46 AC164702.1-201ENSMUST00000220135 2212 ntBASIC16.09■□□□□ 0.17
Smc5Q8CG46 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smc5Q8CG46 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smc5Q8CG46 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smc5Q8CG46 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smc5Q8CG46 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smc5Q8CG46 Gm36970-201ENSMUST00000193688 1859 ntBASIC16.08■□□□□ 0.17
Smc5Q8CG46 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smc5Q8CG46 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smc5Q8CG46 Daam2-202ENSMUST00000224595 1926 ntBASIC16.08■□□□□ 0.16
Smc5Q8CG46 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smc5Q8CG46 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Gm44397-201ENSMUST00000195950 113 ntBASIC16.08■□□□□ 0.16
Smc5Q8CG46 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smc5Q8CG46 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.07■□□□□ 0.16
Smc5Q8CG46 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Gm9061-201ENSMUST00000182707 1006 ntBASIC16.07■□□□□ 0.16
Smc5Q8CG46 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.07■□□□□ 0.16
Smc5Q8CG46 Itm2b-204ENSMUST00000228637 783 ntBASIC16.07■□□□□ 0.16
Smc5Q8CG46 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Smc5Q8CG46 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.07■□□□□ 0.16
Smc5Q8CG46 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Gm13722-201ENSMUST00000117964 3066 ntBASIC16.07■□□□□ 0.16
Smc5Q8CG46 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smc5Q8CG46 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Gm5780-201ENSMUST00000217774 1834 ntBASIC16.06■□□□□ 0.16
Smc5Q8CG46 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Gm15371-201ENSMUST00000117057 784 ntBASIC16.06■□□□□ 0.16
Smc5Q8CG46 Gm5638-201ENSMUST00000118618 1258 ntBASIC16.06■□□□□ 0.16
Smc5Q8CG46 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.06■□□□□ 0.16
Smc5Q8CG46 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.06■□□□□ 0.16
Smc5Q8CG46 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smc5Q8CG46 Gm42829-201ENSMUST00000198417 2585 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms