Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ccdc17Q8CE13 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.55□□□□□ -0.24
Ccdc17Q8CE13 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc17Q8CE13 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc17Q8CE13 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc17Q8CE13 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc17Q8CE13 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc17Q8CE13 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Gm2231-201ENSMUST00000125661 612 ntBASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Gm20482-202ENSMUST00000174729 825 ntBASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc17Q8CE13 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Gm26185-201ENSMUST00000157692 266 ntBASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Mospd4-201ENSMUST00000180618 576 ntBASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Gm44069-201ENSMUST00000204898 506 ntBASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Gm18041-201ENSMUST00000218210 618 ntBASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc17Q8CE13 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc17Q8CE13 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc17Q8CE13 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.52□□□□□ -0.24
Ccdc17Q8CE13 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.52□□□□□ -0.24
Ccdc17Q8CE13 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ccdc17Q8CE13 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc17Q8CE13 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms