Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Gm37497-201ENSMUST00000195830 798 ntBASIC14.36□□□□□ -0.11
Trim9Q8C7M3 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Gm7653-201ENSMUST00000214567 508 ntBASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim9Q8C7M3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim9Q8C7M3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Gm13369-201ENSMUST00000119442 987 ntBASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Gm12291-201ENSMUST00000121627 311 ntBASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.34□□□□□ -0.11
Trim9Q8C7M3 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim9Q8C7M3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim9Q8C7M3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim9Q8C7M3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trim9Q8C7M3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim9Q8C7M3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms