Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Eri3Q8C460 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.39□□□□□ -0.43
Eri3Q8C460 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.39□□□□□ -0.43
Eri3Q8C460 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Eri3Q8C460 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Eri3Q8C460 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.38□□□□□ -0.43
Eri3Q8C460 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.38□□□□□ -0.43
Eri3Q8C460 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Eri3Q8C460 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Eri3Q8C460 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.38□□□□□ -0.43
Eri3Q8C460 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.38□□□□□ -0.43
Eri3Q8C460 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Gm13123-201ENSMUST00000122173 492 ntBASIC12.38□□□□□ -0.43
Eri3Q8C460 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Gm22331-201ENSMUST00000158066 136 ntBASIC12.38□□□□□ -0.43
Eri3Q8C460 Gm8602-201ENSMUST00000184045 607 ntBASIC12.38□□□□□ -0.43
Eri3Q8C460 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.38□□□□□ -0.43
Eri3Q8C460 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Eri3Q8C460 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Eri3Q8C460 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.38□□□□□ -0.43
Eri3Q8C460 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.38□□□□□ -0.43
Eri3Q8C460 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Eri3Q8C460 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Eri3Q8C460 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Eri3Q8C460 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Eri3Q8C460 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Eri3Q8C460 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Eri3Q8C460 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Eri3Q8C460 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Eri3Q8C460 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Eri3Q8C460 Gm4984-201ENSMUST00000115987 360 ntBASIC12.37□□□□□ -0.43
Eri3Q8C460 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.37□□□□□ -0.43
Eri3Q8C460 Gm13369-201ENSMUST00000119442 987 ntBASIC12.37□□□□□ -0.43
Eri3Q8C460 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.37□□□□□ -0.43
Eri3Q8C460 Gm24644-201ENSMUST00000157114 139 ntBASIC12.37□□□□□ -0.43
Eri3Q8C460 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Eri3Q8C460 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Eri3Q8C460 Gm28693-202ENSMUST00000190758 331 ntBASIC12.37□□□□□ -0.43
Eri3Q8C460 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.37□□□□□ -0.43
Eri3Q8C460 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Eri3Q8C460 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.37□□□□□ -0.43
Eri3Q8C460 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Eri3Q8C460 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Eri3Q8C460 Gm6091-201ENSMUST00000098307 165 ntBASIC12.37□□□□□ -0.43
Eri3Q8C460 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.37□□□□□ -0.43
Eri3Q8C460 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.37□□□□□ -0.43
Eri3Q8C460 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Eri3Q8C460 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.37□□□□□ -0.43
Eri3Q8C460 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Eri3Q8C460 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Eri3Q8C460 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.37□□□□□ -0.43
Eri3Q8C460 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Eri3Q8C460 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Eri3Q8C460 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.36□□□□□ -0.43
Eri3Q8C460 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Eri3Q8C460 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Eri3Q8C460 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Eri3Q8C460 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Eri3Q8C460 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Eri3Q8C460 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Eri3Q8C460 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Eri3Q8C460 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Eri3Q8C460 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Eri3Q8C460 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Eri3Q8C460 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Eri3Q8C460 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Eri3Q8C460 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Eri3Q8C460 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.36□□□□□ -0.43
Eri3Q8C460 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Eri3Q8C460 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.36□□□□□ -0.43
Eri3Q8C460 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Eri3Q8C460 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.36□□□□□ -0.43
Eri3Q8C460 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.36□□□□□ -0.43
Eri3Q8C460 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms