Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sh3rf3Q8C120 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Gm16202-201ENSMUST00000117532 544 ntBASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Gm6244-201ENSMUST00000178732 841 ntBASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Gm19931-201ENSMUST00000198920 368 ntBASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf3Q8C120 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.55□□□□□ -0.24
Sh3rf3Q8C120 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 106.9 ms