Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.43□□□□□ -0.26
Trub1Q8C0D0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.43□□□□□ -0.26
Trub1Q8C0D0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trub1Q8C0D0 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trub1Q8C0D0 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.43□□□□□ -0.26
Trub1Q8C0D0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trub1Q8C0D0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trub1Q8C0D0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trub1Q8C0D0 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.43□□□□□ -0.26
Trub1Q8C0D0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trub1Q8C0D0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trub1Q8C0D0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Trub1Q8C0D0 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Gm15806-201ENSMUST00000120696 955 ntBASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Gm9002-201ENSMUST00000178437 499 ntBASIC13.42□□□□□ -0.26
Trub1Q8C0D0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Gm8652-201ENSMUST00000181363 964 ntBASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trub1Q8C0D0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Gm24196-201ENSMUST00000179161 110 ntBASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Gm37922-201ENSMUST00000195596 455 ntBASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Gm17794-201ENSMUST00000220252 955 ntBASIC13.41□□□□□ -0.26
Trub1Q8C0D0 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.41□□□□□ -0.26
Trub1Q8C0D0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trub1Q8C0D0 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms