Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Gm38241-201ENSMUST00000192641 898 ntBASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sh3rf2Q8BZT2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Gm10434-201ENSMUST00000101158 471 ntBASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Gm14381-201ENSMUST00000122105 414 ntBASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Gm13316-201ENSMUST00000140537 691 ntBASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Gm37259-201ENSMUST00000193903 849 ntBASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Gm8099-201ENSMUST00000200510 742 ntBASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf2Q8BZT2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf2Q8BZT2 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms