Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Gm13316-201ENSMUST00000140537 691 ntBASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Gm27516-201ENSMUST00000184237 98 ntBASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Gm7046-201ENSMUST00000221351 977 ntBASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.12□□□□□ -0.31
Ubr7Q8BU04 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.12□□□□□ -0.31
Ubr7Q8BU04 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.12□□□□□ -0.31
Ubr7Q8BU04 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Gm14921-201ENSMUST00000118643 908 ntBASIC13.11□□□□□ -0.31
Ubr7Q8BU04 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Gm23363-201ENSMUST00000175024 79 ntBASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ubr7Q8BU04 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Gm18935-201ENSMUST00000212692 664 ntBASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Mir339-201ENSMUST00000083659 96 ntBASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubr7Q8BU04 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms