Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Gm13142-201ENSMUST00000117213 1453 ntBASIC18.17■□□□□ 0.5
Usp54Q8BL06 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Gm27438-201ENSMUST00000183480 110 ntBASIC18.17■□□□□ 0.5
Usp54Q8BL06 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp54Q8BL06 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC18.17■□□□□ 0.5
Usp54Q8BL06 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 AC166992.1-201ENSMUST00000216356 565 ntBASIC18.17■□□□□ 0.5
Usp54Q8BL06 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Usp54Q8BL06 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC18.16■□□□□ 0.5
Usp54Q8BL06 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp54Q8BL06 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Gm9924-202ENSMUST00000192760 2311 ntBASIC18.16■□□□□ 0.5
Usp54Q8BL06 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp54Q8BL06 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Usp54Q8BL06 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp54Q8BL06 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp54Q8BL06 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp54Q8BL06 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Usp54Q8BL06 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp54Q8BL06 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Usp54Q8BL06 Gm12165-201ENSMUST00000117047 342 ntBASIC18.15■□□□□ 0.5
Usp54Q8BL06 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC18.15■□□□□ 0.5
Usp54Q8BL06 Gm17391-201ENSMUST00000171036 126 ntBASIC18.15■□□□□ 0.5
Usp54Q8BL06 Gm44958-201ENSMUST00000203734 736 ntBASIC18.15■□□□□ 0.5
Usp54Q8BL06 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC18.15■□□□□ 0.5
Usp54Q8BL06 Gm270-201ENSMUST00000223010 976 ntBASIC18.15■□□□□ 0.5
Usp54Q8BL06 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp54Q8BL06 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp54Q8BL06 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp54Q8BL06 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp54Q8BL06 Gm43858-201ENSMUST00000199418 1778 ntBASIC18.15■□□□□ 0.5
Usp54Q8BL06 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Usp54Q8BL06 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Usp54Q8BL06 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC18.14■□□□□ 0.5
Usp54Q8BL06 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Usp54Q8BL06 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Gm12501-201ENSMUST00000119163 529 ntBASIC18.14■□□□□ 0.49
Usp54Q8BL06 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC18.14■□□□□ 0.49
Usp54Q8BL06 Gm18038-201ENSMUST00000197900 485 ntBASIC18.14■□□□□ 0.49
Usp54Q8BL06 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp54Q8BL06 AC133602.1-201ENSMUST00000227510 509 ntBASIC18.14■□□□□ 0.49
Usp54Q8BL06 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Gm44999-201ENSMUST00000207456 1493 ntBASIC18.14■□□□□ 0.49
Usp54Q8BL06 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp54Q8BL06 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Gm5732-201ENSMUST00000182596 1007 ntBASIC18.13■□□□□ 0.49
Usp54Q8BL06 Mir7686-201ENSMUST00000200604 57 ntBASIC18.13■□□□□ 0.49
Usp54Q8BL06 AC153954.1-201ENSMUST00000216959 255 ntBASIC18.13■□□□□ 0.49
Usp54Q8BL06 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Usp54Q8BL06 Gm21811-201ENSMUST00000096485 930 ntBASIC18.13■□□□□ 0.49
Usp54Q8BL06 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms