Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ubp1Q811S7 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ubp1Q811S7 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Gm13369-201ENSMUST00000119442 987 ntBASIC12.87□□□□□ -0.35
Ubp1Q811S7 Gm23958-201ENSMUST00000157207 105 ntBASIC12.87□□□□□ -0.35
Ubp1Q811S7 Gm17150-201ENSMUST00000165577 381 ntBASIC12.87□□□□□ -0.35
Ubp1Q811S7 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Gm24196-201ENSMUST00000179161 110 ntBASIC12.87□□□□□ -0.35
Ubp1Q811S7 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Gm37319-201ENSMUST00000193500 636 ntBASIC12.87□□□□□ -0.35
Ubp1Q811S7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Gm7561-201ENSMUST00000211203 886 ntBASIC12.87□□□□□ -0.35
Ubp1Q811S7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.87□□□□□ -0.35
Ubp1Q811S7 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ubp1Q811S7 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.86□□□□□ -0.35
Ubp1Q811S7 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ubp1Q811S7 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.86□□□□□ -0.35
Ubp1Q811S7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Gm11618-201ENSMUST00000117946 267 ntBASIC12.86□□□□□ -0.35
Ubp1Q811S7 Gm8213-201ENSMUST00000118191 441 ntBASIC12.86□□□□□ -0.35
Ubp1Q811S7 Gm12203-201ENSMUST00000118235 598 ntBASIC12.86□□□□□ -0.35
Ubp1Q811S7 Gm13183-201ENSMUST00000118615 789 ntBASIC12.86□□□□□ -0.35
Ubp1Q811S7 Gm12209-201ENSMUST00000120089 596 ntBASIC12.86□□□□□ -0.35
Ubp1Q811S7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.86□□□□□ -0.35
Ubp1Q811S7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.86□□□□□ -0.35
Ubp1Q811S7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ubp1Q811S7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms