Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Prpf40bQ80W14 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Gm11618-201ENSMUST00000117946 267 ntBASIC15.04■□□□□ -0
Prpf40bQ80W14 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.04■□□□□ -0
Prpf40bQ80W14 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.04■□□□□ -0
Prpf40bQ80W14 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.04■□□□□ -0
Prpf40bQ80W14 Mir5120-201ENSMUST00000175020 78 ntBASIC15.04■□□□□ -0
Prpf40bQ80W14 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC15.04■□□□□ -0
Prpf40bQ80W14 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.04■□□□□ -0
Prpf40bQ80W14 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.04■□□□□ -0
Prpf40bQ80W14 Gm29787-201ENSMUST00000222129 849 ntBASIC15.04■□□□□ -0
Prpf40bQ80W14 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.04■□□□□ -0
Prpf40bQ80W14 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.04■□□□□ -0
Prpf40bQ80W14 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Prpf40bQ80W14 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.04■□□□□ -0
Prpf40bQ80W14 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40bQ80W14 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Prpf40bQ80W14 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.03■□□□□ -0
Prpf40bQ80W14 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.03■□□□□ -0
Prpf40bQ80W14 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Prpf40bQ80W14 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Gm14017-201ENSMUST00000121934 386 ntBASIC15.03■□□□□ -0
Prpf40bQ80W14 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Prpf40bQ80W14 Gm22334-201ENSMUST00000158070 133 ntBASIC15.03■□□□□ -0
Prpf40bQ80W14 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.03■□□□□ -0
Prpf40bQ80W14 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.03■□□□□ -0
Prpf40bQ80W14 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Prpf40bQ80W14 AC153937.1-201ENSMUST00000218734 412 ntBASIC15.03■□□□□ -0
Prpf40bQ80W14 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.03■□□□□ -0
Prpf40bQ80W14 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.03■□□□□ -0
Prpf40bQ80W14 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Prpf40bQ80W14 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.03■□□□□ -0
Prpf40bQ80W14 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf40bQ80W14 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Prpf40bQ80W14 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.02■□□□□ -0
Prpf40bQ80W14 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.02■□□□□ -0
Prpf40bQ80W14 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC15.02■□□□□ -0
Prpf40bQ80W14 Gm11591-201ENSMUST00000120063 702 ntBASIC15.02■□□□□ -0
Prpf40bQ80W14 Gm12715-201ENSMUST00000121430 1128 ntBASIC15.02■□□□□ -0
Prpf40bQ80W14 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC15.02■□□□□ -0
Prpf40bQ80W14 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.02■□□□□ -0
Prpf40bQ80W14 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.02■□□□□ -0
Prpf40bQ80W14 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40bQ80W14 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40bQ80W14 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40bQ80W14 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40bQ80W14 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms