Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Prpf38bQ80SY5 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Gm25927-201ENSMUST00000175058 117 ntBASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Gm5523-201ENSMUST00000180415 997 ntBASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Gm7046-201ENSMUST00000221351 977 ntBASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Prpf38bQ80SY5 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Gm2445-201ENSMUST00000182798 989 ntBASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf38bQ80SY5 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf38bQ80SY5 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms