Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Gm22018-201ENSMUST00000104357 131 ntBASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Gm18041-201ENSMUST00000218210 618 ntBASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh8Q7TSK3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Gm38266-201ENSMUST00000194931 421 ntBASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh8Q7TSK3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Gm16379-201ENSMUST00000161469 348 ntBASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.84□□□□□ -0.35
Pcdh8Q7TSK3 Gm8762-201ENSMUST00000193486 339 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms