Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubfd1Q78JW9 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubfd1Q78JW9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Snord83b-201ENSMUST00000104546 94 ntBASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Gm12241-201ENSMUST00000118330 726 ntBASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Gm14723-201ENSMUST00000118686 215 ntBASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Mospd4-201ENSMUST00000180618 576 ntBASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Gm27516-201ENSMUST00000184237 98 ntBASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubfd1Q78JW9 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Gm14704-201ENSMUST00000120300 874 ntBASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Mir8109-201ENSMUST00000184375 117 ntBASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Gm38158-201ENSMUST00000194617 339 ntBASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Gm43822-201ENSMUST00000200285 476 ntBASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Gm10608-202ENSMUST00000213924 676 ntBASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubfd1Q78JW9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubfd1Q78JW9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubfd1Q78JW9 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubfd1Q78JW9 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.66□□□□□ -0.38
Ubfd1Q78JW9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ubfd1Q78JW9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ubfd1Q78JW9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubfd1Q78JW9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms