Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Gm17040-202ENSMUST00000170597 889 ntBASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Mir7032-201ENSMUST00000185154 79 ntBASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Gm45118-201ENSMUST00000208928 825 ntBASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx55Q6ZPL9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Gm12015-201ENSMUST00000117065 843 ntBASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Gm12616-201ENSMUST00000118594 382 ntBASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Gm14999-201ENSMUST00000121039 624 ntBASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Gm5070-201ENSMUST00000177599 862 ntBASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Gm12624-201ENSMUST00000177615 382 ntBASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Gm12621-201ENSMUST00000177760 382 ntBASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Gm12615-201ENSMUST00000177970 382 ntBASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Gm12622-201ENSMUST00000177975 382 ntBASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Gm12627-201ENSMUST00000178412 382 ntBASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Gm12625-201ENSMUST00000179122 382 ntBASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Gm12614-201ENSMUST00000179586 382 ntBASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Gm12613-201ENSMUST00000180323 382 ntBASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Gm37666-201ENSMUST00000194110 866 ntBASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Mir339-201ENSMUST00000083659 96 ntBASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ddx55Q6ZPL9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx55Q6ZPL9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx55Q6ZPL9 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx55Q6ZPL9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx55Q6ZPL9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx55Q6ZPL9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx55Q6ZPL9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx55Q6ZPL9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.73□□□□□ -0.05
Ddx55Q6ZPL9 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ddx55Q6ZPL9 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx55Q6ZPL9 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx55Q6ZPL9 Gm32999-201ENSMUST00000192693 562 ntBASIC14.73□□□□□ -0.05
Ddx55Q6ZPL9 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.73□□□□□ -0.05
Ddx55Q6ZPL9 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.73□□□□□ -0.05
Ddx55Q6ZPL9 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx55Q6ZPL9 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.73□□□□□ -0.05
Ddx55Q6ZPL9 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx55Q6ZPL9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ddx55Q6ZPL9 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms