Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nup98Q6PFD9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Nup98Q6PFD9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.08■□□□□ 0
Nup98Q6PFD9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nup98Q6PFD9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nup98Q6PFD9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nup98Q6PFD9 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Nup98Q6PFD9 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC15.08■□□□□ 0
Nup98Q6PFD9 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.08■□□□□ 0
Nup98Q6PFD9 Gm13996-201ENSMUST00000118456 430 ntBASIC15.08■□□□□ 0
Nup98Q6PFD9 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nup98Q6PFD9 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC15.08■□□□□ 0
Nup98Q6PFD9 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC15.08■□□□□ 0
Nup98Q6PFD9 AC166344.1-202ENSMUST00000224139 234 ntBASIC15.08■□□□□ 0
Nup98Q6PFD9 AC131330.1-201ENSMUST00000227814 1015 ntBASIC15.08■□□□□ 0
Nup98Q6PFD9 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC15.08■□□□□ 0
Nup98Q6PFD9 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.08■□□□□ 0
Nup98Q6PFD9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Nup98Q6PFD9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nup98Q6PFD9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Nup98Q6PFD9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Nup98Q6PFD9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nup98Q6PFD9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nup98Q6PFD9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nup98Q6PFD9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Nup98Q6PFD9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nup98Q6PFD9 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nup98Q6PFD9 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Nup98Q6PFD9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nup98Q6PFD9 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Nup98Q6PFD9 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nup98Q6PFD9 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC15.07■□□□□ 0
Nup98Q6PFD9 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nup98Q6PFD9 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nup98Q6PFD9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Nup98Q6PFD9 Gm28882-201ENSMUST00000185504 314 ntBASIC15.07■□□□□ 0
Nup98Q6PFD9 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nup98Q6PFD9 Gm45433-201ENSMUST00000209386 247 ntBASIC15.07■□□□□ 0
Nup98Q6PFD9 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC15.07■□□□□ 0
Nup98Q6PFD9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nup98Q6PFD9 Gm5884-201ENSMUST00000036712 1479 ntBASIC15.07■□□□□ 0
Nup98Q6PFD9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Nup98Q6PFD9 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Nup98Q6PFD9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nup98Q6PFD9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nup98Q6PFD9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nup98Q6PFD9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nup98Q6PFD9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.07■□□□□ 0
Nup98Q6PFD9 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nup98Q6PFD9 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.06■□□□□ 0
Nup98Q6PFD9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Nup98Q6PFD9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC15.06■□□□□ 0
Nup98Q6PFD9 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC15.06■□□□□ 0
Nup98Q6PFD9 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC15.06■□□□□ 0
Nup98Q6PFD9 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC15.06■□□□□ 0
Nup98Q6PFD9 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC15.06■□□□□ 0
Nup98Q6PFD9 Gm19208-201ENSMUST00000213861 912 ntBASIC15.06■□□□□ 0
Nup98Q6PFD9 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.06■□□□□ 0
Nup98Q6PFD9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.06■□□□□ 0
Nup98Q6PFD9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC15.06■□□□□ 0
Nup98Q6PFD9 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC15.06■□□□□ 0
Nup98Q6PFD9 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Nup98Q6PFD9 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC15.06■□□□□ 0
Nup98Q6PFD9 Gm43138-201ENSMUST00000199123 708 ntBASIC15.06■□□□□ 0
Nup98Q6PFD9 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.06■□□□□ 0
Nup98Q6PFD9 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Nup98Q6PFD9 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nup98Q6PFD9 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms