Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Gm8000-201ENSMUST00000188378 592 ntBASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.34□□□□□ -0.43
Rnf220Q6PDX6 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.33□□□□□ -0.43
Rnf220Q6PDX6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf220Q6PDX6 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf220Q6PDX6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms