Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Casc4Q6P2L7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.21□□□□□ -0.29
Casc4Q6P2L7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Gm11803-201ENSMUST00000119966 444 ntBASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Gm8810-201ENSMUST00000172895 754 ntBASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Gm45841-201ENSMUST00000207700 164 ntBASIC13.21□□□□□ -0.29
Casc4Q6P2L7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Casc4Q6P2L7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Casc4Q6P2L7 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Casc4Q6P2L7 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Casc4Q6P2L7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Casc4Q6P2L7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Gm16202-201ENSMUST00000117532 544 ntBASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Proscos-202ENSMUST00000178990 666 ntBASIC13.2□□□□□ -0.3
Casc4Q6P2L7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.2□□□□□ -0.3
Casc4Q6P2L7 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Casc4Q6P2L7 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Gm24196-201ENSMUST00000179161 110 ntBASIC13.19□□□□□ -0.3
Casc4Q6P2L7 Gm18187-201ENSMUST00000196476 984 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms