Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slx4Q6P1D7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Gm4482-201ENSMUST00000200876 742 ntBASIC19.67■□□□□ 0.74
Slx4Q6P1D7 AC099645.1-201ENSMUST00000226476 1105 ntBASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Gm30238-201ENSMUST00000195528 2603 ntBASIC19.67■□□□□ 0.74
Slx4Q6P1D7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Gm9924-202ENSMUST00000192760 2311 ntBASIC19.67■□□□□ 0.74
Slx4Q6P1D7 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Gm15881-201ENSMUST00000148792 942 ntBASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Gm28071-201ENSMUST00000190355 478 ntBASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Gm18038-201ENSMUST00000197900 485 ntBASIC19.66■□□□□ 0.74
Slx4Q6P1D7 CT025551.1-201ENSMUST00000223996 692 ntBASIC19.66■□□□□ 0.74
Slx4Q6P1D7 AC133602.1-201ENSMUST00000227510 509 ntBASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 AC137842.1-201ENSMUST00000227896 2064 ntBASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Gm44891-201ENSMUST00000208817 2223 ntBASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Gm17827-201ENSMUST00000211825 742 ntBASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Gm25517-201ENSMUST00000083865 134 ntBASIC19.66■□□□□ 0.74
Slx4Q6P1D7 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Gm44401-201ENSMUST00000204462 2375 ntBASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Gm12795-201ENSMUST00000117594 539 ntBASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Mup-ps26-201ENSMUST00000121751 202 ntBASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Gm9463-201ENSMUST00000206707 601 ntBASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Olfr1347-205ENSMUST00000220413 964 ntBASIC19.65■□□□□ 0.74
Slx4Q6P1D7 AC154252.2-201ENSMUST00000223593 767 ntBASIC19.65■□□□□ 0.74
Slx4Q6P1D7 AC129219.2-201ENSMUST00000224324 701 ntBASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slx4Q6P1D7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms