Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Krt42Q6IFX2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Krt42Q6IFX2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Krt42Q6IFX2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Krt42Q6IFX2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Gm15653-201ENSMUST00000119247 907 ntBASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt42Q6IFX2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Krt42Q6IFX2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Krt42Q6IFX2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Krt42Q6IFX2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Krt42Q6IFX2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms