Protein–RNA interactions for Protein: Q6DFW4

Nop58, Nucleolar protein 58, mousemouse

Known RBP Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop58Q6DFW4 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Gm24543-201ENSMUST00000103867 82 ntBASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Gm12537-201ENSMUST00000119266 1002 ntBASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Gm12070-201ENSMUST00000119551 1002 ntBASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Gm12671-201ENSMUST00000119978 1002 ntBASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Gm13292-201ENSMUST00000120014 1000 ntBASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Gm12403-201ENSMUST00000121384 959 ntBASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Gm10359-201ENSMUST00000180167 1002 ntBASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Gm12033-201ENSMUST00000180654 1002 ntBASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Gm5559-201ENSMUST00000180755 1002 ntBASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Gm4335-201ENSMUST00000182581 1004 ntBASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Gm44124-201ENSMUST00000204159 472 ntBASIC17.91■□□□□ 0.46
Nop58Q6DFW4 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Gm7224-201ENSMUST00000121359 2066 ntBASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nop58Q6DFW4 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 AC157950.1-201ENSMUST00000217561 2168 ntBASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Gm18983-201ENSMUST00000222884 2729 ntBASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nop58Q6DFW4 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nop58Q6DFW4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nop58Q6DFW4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Nop58Q6DFW4 Gm43721-201ENSMUST00000199677 2313 ntBASIC17.89■□□□□ 0.46
Nop58Q6DFW4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nop58Q6DFW4 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Gm18889-201ENSMUST00000174284 929 ntBASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Gm27741-201ENSMUST00000185060 237 ntBASIC17.89■□□□□ 0.45
Nop58Q6DFW4 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Gm17330-201ENSMUST00000221047 165 ntBASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Nop58Q6DFW4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms