Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Ss18Q62280 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC9.62□□□□□ -0.87
Ss18Q62280 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC9.62□□□□□ -0.87
Ss18Q62280 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC9.62□□□□□ -0.87
Ss18Q62280 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Ss18Q62280 Gm17330-201ENSMUST00000221047 165 ntBASIC9.62□□□□□ -0.87
Ss18Q62280 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Ss18Q62280 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC9.62□□□□□ -0.87
Ss18Q62280 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Ss18Q62280 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Ss18Q62280 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Ss18Q62280 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
Ss18Q62280 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Ss18Q62280 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ss18Q62280 Gm7049-201ENSMUST00000223520 1712 ntBASIC9.62□□□□□ -0.87
Ss18Q62280 AC164702.1-201ENSMUST00000220135 2212 ntBASIC9.62□□□□□ -0.87
Ss18Q62280 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC9.61□□□□□ -0.87
Ss18Q62280 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.61□□□□□ -0.87
Ss18Q62280 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ss18Q62280 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Gm5422-201ENSMUST00000050717 2721 ntBASIC9.61□□□□□ -0.87
Ss18Q62280 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ss18Q62280 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ss18Q62280 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ss18Q62280 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC9.61□□□□□ -0.87
Ss18Q62280 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC9.61□□□□□ -0.87
Ss18Q62280 Gm15240-201ENSMUST00000118156 720 ntBASIC9.61□□□□□ -0.87
Ss18Q62280 Gm13223-201ENSMUST00000118609 747 ntBASIC9.61□□□□□ -0.87
Ss18Q62280 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC9.61□□□□□ -0.87
Ss18Q62280 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC9.61□□□□□ -0.87
Ss18Q62280 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC9.61□□□□□ -0.87
Ss18Q62280 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC9.61□□□□□ -0.87
Ss18Q62280 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Gm10576-201ENSMUST00000191927 825 ntBASIC9.61□□□□□ -0.87
Ss18Q62280 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC9.61□□□□□ -0.87
Ss18Q62280 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC9.61□□□□□ -0.87
Ss18Q62280 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC9.61□□□□□ -0.87
Ss18Q62280 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC9.61□□□□□ -0.87
Ss18Q62280 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC9.61□□□□□ -0.87
Ss18Q62280 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Gm20445-201ENSMUST00000061905 565 ntBASIC9.61□□□□□ -0.87
Ss18Q62280 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
Ss18Q62280 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Ss18Q62280 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ss18Q62280 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ss18Q62280 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ss18Q62280 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Ss18Q62280 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ss18Q62280 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Ss18Q62280 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ss18Q62280 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC9.6□□□□□ -0.87
Ss18Q62280 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ss18Q62280 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ss18Q62280 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ss18Q62280 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ss18Q62280 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms