Protein–RNA interactions for Protein: Q61850

Foxc2, Forkhead box protein C2, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc2Q61850 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Foxc2Q61850 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Foxc2Q61850 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Foxc2Q61850 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Foxc2Q61850 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Foxc2Q61850 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Foxc2Q61850 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.39□□□□□ -0.75
Foxc2Q61850 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Foxc2Q61850 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Foxc2Q61850 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Foxc2Q61850 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Foxc2Q61850 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Foxc2Q61850 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.39□□□□□ -0.75
Foxc2Q61850 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Foxc2Q61850 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Grk6-205ENSMUST00000224653 2976 ntBASIC10.38□□□□□ -0.75
Foxc2Q61850 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Foxc2Q61850 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Foxc2Q61850 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Foxc2Q61850 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Foxc2Q61850 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.38□□□□□ -0.75
Foxc2Q61850 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Foxc2Q61850 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Foxc2Q61850 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.38□□□□□ -0.75
Foxc2Q61850 Gm15376-201ENSMUST00000122258 783 ntBASIC10.38□□□□□ -0.75
Foxc2Q61850 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.38□□□□□ -0.75
Foxc2Q61850 Gm26464-201ENSMUST00000157094 305 ntBASIC10.38□□□□□ -0.75
Foxc2Q61850 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Foxc2Q61850 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Mir7654-201ENSMUST00000185082 70 ntBASIC10.38□□□□□ -0.75
Foxc2Q61850 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.38□□□□□ -0.75
Foxc2Q61850 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.38□□□□□ -0.75
Foxc2Q61850 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.38□□□□□ -0.75
Foxc2Q61850 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.38□□□□□ -0.75
Foxc2Q61850 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.38□□□□□ -0.75
Foxc2Q61850 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.38□□□□□ -0.75
Foxc2Q61850 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Foxc2Q61850 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Foxc2Q61850 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Foxc2Q61850 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Foxc2Q61850 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Foxc2Q61850 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.38□□□□□ -0.75
Foxc2Q61850 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.38□□□□□ -0.75
Foxc2Q61850 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Foxc2Q61850 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Foxc2Q61850 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc2Q61850 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc2Q61850 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc2Q61850 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc2Q61850 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc2Q61850 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Foxc2Q61850 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Foxc2Q61850 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc2Q61850 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc2Q61850 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.37□□□□□ -0.75
Foxc2Q61850 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc2Q61850 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc2Q61850 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Foxc2Q61850 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.37□□□□□ -0.75
Foxc2Q61850 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.37□□□□□ -0.75
Foxc2Q61850 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc2Q61850 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.37□□□□□ -0.75
Foxc2Q61850 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc2Q61850 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.37□□□□□ -0.75
Foxc2Q61850 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc2Q61850 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Foxc2Q61850 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms