Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Gli3Q61602 Gm26286-201ENSMUST00000104166 134 ntBASIC17.07■□□□□ 0.32
Gli3Q61602 Gm24791-201ENSMUST00000104284 131 ntBASIC17.07■□□□□ 0.32
Gli3Q61602 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Gli3Q61602 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC17.07■□□□□ 0.32
Gli3Q61602 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Gli3Q61602 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC17.07■□□□□ 0.32
Gli3Q61602 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC17.07■□□□□ 0.32
Gli3Q61602 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Gli3Q61602 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 AC154725.1-201ENSMUST00000224826 1961 ntBASIC17.07■□□□□ 0.32
Gli3Q61602 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC17.07■□□□□ 0.32
Gli3Q61602 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gli3Q61602 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gli3Q61602 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC17.06■□□□□ 0.32
Gli3Q61602 Gm23119-201ENSMUST00000158610 140 ntBASIC17.06■□□□□ 0.32
Gli3Q61602 Gm38228-201ENSMUST00000193169 1293 ntBASIC17.06■□□□□ 0.32
Gli3Q61602 Gm42629-201ENSMUST00000199063 1102 ntBASIC17.06■□□□□ 0.32
Gli3Q61602 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC17.06■□□□□ 0.32
Gli3Q61602 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC17.06■□□□□ 0.32
Gli3Q61602 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli3Q61602 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.06■□□□□ 0.32
Gli3Q61602 AC122350.1-201ENSMUST00000228135 533 ntBASIC17.06■□□□□ 0.32
Gli3Q61602 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC17.06■□□□□ 0.32
Gli3Q61602 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Gli3Q61602 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli3Q61602 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gli3Q61602 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Gli3Q61602 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli3Q61602 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli3Q61602 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli3Q61602 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli3Q61602 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli3Q61602 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gli3Q61602 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli3Q61602 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC17.06■□□□□ 0.32
Gli3Q61602 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli3Q61602 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Gli3Q61602 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli3Q61602 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Gli3Q61602 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gli3Q61602 Gm9916-201ENSMUST00000192943 1228 ntBASIC17.06■□□□□ 0.32
Gli3Q61602 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC17.06■□□□□ 0.32
Gli3Q61602 AC129308.3-201ENSMUST00000225652 524 ntBASIC17.06■□□□□ 0.32
Gli3Q61602 AC102368.1-201ENSMUST00000227161 892 ntBASIC17.06■□□□□ 0.32
Gli3Q61602 Gm16380-201ENSMUST00000077997 478 ntBASIC17.06■□□□□ 0.32
Gli3Q61602 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli3Q61602 AC166574.4-201ENSMUST00000227165 1937 ntBASIC17.06■□□□□ 0.32
Gli3Q61602 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli3Q61602 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gli3Q61602 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli3Q61602 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli3Q61602 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli3Q61602 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli3Q61602 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.05■□□□□ 0.32
Gli3Q61602 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli3Q61602 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gli3Q61602 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gli3Q61602 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli3Q61602 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gli3Q61602 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli3Q61602 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Gli3Q61602 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli3Q61602 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli3Q61602 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC17.05■□□□□ 0.32
Gli3Q61602 Gng5-ps-201ENSMUST00000120931 205 ntBASIC17.05■□□□□ 0.32
Gli3Q61602 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC17.05■□□□□ 0.32
Gli3Q61602 Gm18367-201ENSMUST00000176139 600 ntBASIC17.05■□□□□ 0.32
Gli3Q61602 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gli3Q61602 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC17.05■□□□□ 0.32
Gli3Q61602 AC134860.1-201ENSMUST00000224867 660 ntBASIC17.05■□□□□ 0.32
Gli3Q61602 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli3Q61602 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli3Q61602 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Gli3Q61602 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli3Q61602 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gli3Q61602 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms