Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm10253-201ENSMUST00000194270 940 ntBASIC12.2□□□□□ -0.46
Sox17Q61473 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.2□□□□□ -0.46
Sox17Q61473 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.2□□□□□ -0.46
Sox17Q61473 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox17Q61473 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Sox17Q61473 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.2□□□□□ -0.46
Sox17Q61473 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sox17Q61473 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.2□□□□□ -0.46
Sox17Q61473 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox17Q61473 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.2□□□□□ -0.46
Sox17Q61473 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
Sox17Q61473 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sox17Q61473 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.19□□□□□ -0.46
Sox17Q61473 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox17Q61473 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Sox17Q61473 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Gm7774-201ENSMUST00000200064 533 ntBASIC12.19□□□□□ -0.46
Sox17Q61473 Gm18905-201ENSMUST00000205454 928 ntBASIC12.19□□□□□ -0.46
Sox17Q61473 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.19□□□□□ -0.46
Sox17Q61473 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.19□□□□□ -0.46
Sox17Q61473 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sox17Q61473 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sox17Q61473 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox17Q61473 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox17Q61473 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox17Q61473 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sox17Q61473 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sox17Q61473 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.18□□□□□ -0.46
Sox17Q61473 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sox17Q61473 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.18□□□□□ -0.46
Sox17Q61473 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.18□□□□□ -0.46
Sox17Q61473 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Sox17Q61473 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.18□□□□□ -0.46
Sox17Q61473 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Gm5425-201ENSMUST00000214125 459 ntBASIC12.18□□□□□ -0.46
Sox17Q61473 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sox17Q61473 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.18□□□□□ -0.46
Sox17Q61473 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox17Q61473 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.18□□□□□ -0.46
Sox17Q61473 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms