Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.41□□□□□ -0.1
Ift88Q61371 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.41□□□□□ -0.1
Ift88Q61371 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.41□□□□□ -0.1
Ift88Q61371 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.41□□□□□ -0.1
Ift88Q61371 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.41□□□□□ -0.1
Ift88Q61371 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ift88Q61371 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ift88Q61371 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.41□□□□□ -0.1
Ift88Q61371 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.41□□□□□ -0.1
Ift88Q61371 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ift88Q61371 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ift88Q61371 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ift88Q61371 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ift88Q61371 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ift88Q61371 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ift88Q61371 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ift88Q61371 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ift88Q61371 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ift88Q61371 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ift88Q61371 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ift88Q61371 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ift88Q61371 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ift88Q61371 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ift88Q61371 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ift88Q61371 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ift88Q61371 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ift88Q61371 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.4□□□□□ -0.1
Ift88Q61371 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ift88Q61371 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ift88Q61371 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ift88Q61371 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ift88Q61371 Gm22189-201ENSMUST00000103822 86 ntBASIC14.4□□□□□ -0.1
Ift88Q61371 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Ift88Q61371 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ift88Q61371 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ift88Q61371 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.4□□□□□ -0.1
Ift88Q61371 Gm15321-201ENSMUST00000121290 288 ntBASIC14.4□□□□□ -0.1
Ift88Q61371 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ift88Q61371 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ift88Q61371 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ift88Q61371 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ift88Q61371 Gm5354-201ENSMUST00000182417 973 ntBASIC14.4□□□□□ -0.1
Ift88Q61371 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.4□□□□□ -0.1
Ift88Q61371 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.4□□□□□ -0.1
Ift88Q61371 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ift88Q61371 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ift88Q61371 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ift88Q61371 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ift88Q61371 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ift88Q61371 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ift88Q61371 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.4□□□□□ -0.1
Ift88Q61371 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ift88Q61371 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ift88Q61371 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ift88Q61371 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Ift88Q61371 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.11
Ift88Q61371 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Ift88Q61371 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.39□□□□□ -0.11
Ift88Q61371 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.39□□□□□ -0.11
Ift88Q61371 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ift88Q61371 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.39□□□□□ -0.11
Ift88Q61371 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.39□□□□□ -0.11
Ift88Q61371 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.39□□□□□ -0.11
Ift88Q61371 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.39□□□□□ -0.11
Ift88Q61371 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.39□□□□□ -0.11
Ift88Q61371 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.39□□□□□ -0.11
Ift88Q61371 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ift88Q61371 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ift88Q61371 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ift88Q61371 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ift88Q61371 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ift88Q61371 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ift88Q61371 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ift88Q61371 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ift88Q61371 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms