Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.53□□□□□ -0.4
Col12a1Q60847 Gm42937-201ENSMUST00000197360 752 ntBASIC12.53□□□□□ -0.4
Col12a1Q60847 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.53□□□□□ -0.4
Col12a1Q60847 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col12a1Q60847 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col12a1Q60847 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Col12a1Q60847 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col12a1Q60847 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col12a1Q60847 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col12a1Q60847 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col12a1Q60847 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Col12a1Q60847 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.52□□□□□ -0.4
Col12a1Q60847 Gm45594-201ENSMUST00000211717 241 ntBASIC12.52□□□□□ -0.4
Col12a1Q60847 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.52□□□□□ -0.4
Col12a1Q60847 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col12a1Q60847 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col12a1Q60847 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col12a1Q60847 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.52□□□□□ -0.41
Col12a1Q60847 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col12a1Q60847 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col12a1Q60847 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col12a1Q60847 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col12a1Q60847 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col12a1Q60847 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.52□□□□□ -0.41
Col12a1Q60847 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col12a1Q60847 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col12a1Q60847 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Col12a1Q60847 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col12a1Q60847 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col12a1Q60847 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col12a1Q60847 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Col12a1Q60847 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col12a1Q60847 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col12a1Q60847 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col12a1Q60847 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col12a1Q60847 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col12a1Q60847 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col12a1Q60847 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col12a1Q60847 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.51□□□□□ -0.41
Col12a1Q60847 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.51□□□□□ -0.41
Col12a1Q60847 Gm16296-201ENSMUST00000159905 325 ntBASIC12.51□□□□□ -0.41
Col12a1Q60847 Gm18059-201ENSMUST00000208073 580 ntBASIC12.51□□□□□ -0.41
Col12a1Q60847 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col12a1Q60847 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col12a1Q60847 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col12a1Q60847 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Col12a1Q60847 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.51□□□□□ -0.41
Col12a1Q60847 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.51□□□□□ -0.41
Col12a1Q60847 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Gm4654-201ENSMUST00000183305 982 ntBASIC12.51□□□□□ -0.41
Col12a1Q60847 Gm37458-201ENSMUST00000194055 410 ntBASIC12.51□□□□□ -0.41
Col12a1Q60847 Gm18463-201ENSMUST00000207258 474 ntBASIC12.51□□□□□ -0.41
Col12a1Q60847 Gm18460-201ENSMUST00000208088 464 ntBASIC12.51□□□□□ -0.41
Col12a1Q60847 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.51□□□□□ -0.41
Col12a1Q60847 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.51□□□□□ -0.41
Col12a1Q60847 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col12a1Q60847 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col12a1Q60847 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col12a1Q60847 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.51□□□□□ -0.41
Col12a1Q60847 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col12a1Q60847 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.51□□□□□ -0.41
Col12a1Q60847 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Gm12291-201ENSMUST00000121627 311 ntBASIC12.51□□□□□ -0.41
Col12a1Q60847 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.51□□□□□ -0.41
Col12a1Q60847 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.51□□□□□ -0.41
Col12a1Q60847 Gm4157-201ENSMUST00000211647 679 ntBASIC12.51□□□□□ -0.41
Col12a1Q60847 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.51□□□□□ -0.41
Col12a1Q60847 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col12a1Q60847 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col12a1Q60847 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.5□□□□□ -0.41
Col12a1Q60847 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.5□□□□□ -0.41
Col12a1Q60847 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col12a1Q60847 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col12a1Q60847 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Gm14219-201ENSMUST00000120414 288 ntBASIC12.5□□□□□ -0.41
Col12a1Q60847 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms