Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ClpbQ60649 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ClpbQ60649 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 Gm8652-201ENSMUST00000181363 964 ntBASIC12.52□□□□□ -0.41
ClpbQ60649 Gm27847-201ENSMUST00000183711 107 ntBASIC12.52□□□□□ -0.41
ClpbQ60649 Gm27375-201ENSMUST00000183799 107 ntBASIC12.52□□□□□ -0.41
ClpbQ60649 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.52□□□□□ -0.41
ClpbQ60649 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.52□□□□□ -0.41
ClpbQ60649 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.52□□□□□ -0.41
ClpbQ60649 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.52□□□□□ -0.41
ClpbQ60649 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.52□□□□□ -0.41
ClpbQ60649 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.52□□□□□ -0.41
ClpbQ60649 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
ClpbQ60649 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.52□□□□□ -0.41
ClpbQ60649 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClpbQ60649 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
ClpbQ60649 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.52□□□□□ -0.41
ClpbQ60649 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ClpbQ60649 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.51□□□□□ -0.41
ClpbQ60649 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ClpbQ60649 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.51□□□□□ -0.41
ClpbQ60649 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ClpbQ60649 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.51□□□□□ -0.41
ClpbQ60649 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.51□□□□□ -0.41
ClpbQ60649 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.51□□□□□ -0.41
ClpbQ60649 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ClpbQ60649 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ClpbQ60649 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.51□□□□□ -0.41
ClpbQ60649 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClpbQ60649 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.5□□□□□ -0.41
ClpbQ60649 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ClpbQ60649 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Gm12390-201ENSMUST00000117897 397 ntBASIC12.5□□□□□ -0.41
ClpbQ60649 Gm5687-201ENSMUST00000118252 640 ntBASIC12.5□□□□□ -0.41
ClpbQ60649 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.5□□□□□ -0.41
ClpbQ60649 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.5□□□□□ -0.41
ClpbQ60649 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.5□□□□□ -0.41
ClpbQ60649 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClpbQ60649 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.5□□□□□ -0.41
ClpbQ60649 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.5□□□□□ -0.41
ClpbQ60649 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.5□□□□□ -0.41
ClpbQ60649 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.5□□□□□ -0.41
ClpbQ60649 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.5□□□□□ -0.41
ClpbQ60649 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms