Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.44□□□□□ -0.42
Nr1h4Q60641 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.44□□□□□ -0.42
Nr1h4Q60641 Gm17837-201ENSMUST00000186435 985 ntBASIC12.44□□□□□ -0.42
Nr1h4Q60641 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.44□□□□□ -0.42
Nr1h4Q60641 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.44□□□□□ -0.42
Nr1h4Q60641 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.44□□□□□ -0.42
Nr1h4Q60641 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.44□□□□□ -0.42
Nr1h4Q60641 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Nr1h4Q60641 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.43□□□□□ -0.42
Nr1h4Q60641 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.43□□□□□ -0.42
Nr1h4Q60641 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Gm12485-201ENSMUST00000119641 291 ntBASIC12.43□□□□□ -0.42
Nr1h4Q60641 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.43□□□□□ -0.42
Nr1h4Q60641 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Gm7775-201ENSMUST00000218871 853 ntBASIC12.43□□□□□ -0.42
Nr1h4Q60641 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.43□□□□□ -0.42
Nr1h4Q60641 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nr1h4Q60641 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.42□□□□□ -0.42
Nr1h4Q60641 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.42□□□□□ -0.42
Nr1h4Q60641 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Nr1h4Q60641 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.42□□□□□ -0.42
Nr1h4Q60641 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nr1h4Q60641 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms