Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Gm18018-201ENSMUST00000198273 408 ntBASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav5d-4Q5R1F6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Gm12091-201ENSMUST00000146791 830 ntBASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav5d-4Q5R1F6 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav5d-4Q5R1F6 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms