Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Urb1Q571H0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Urb1Q571H0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12□□□□□ -0.49
Urb1Q571H0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Urb1Q571H0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Urb1Q571H0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Urb1Q571H0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Urb1Q571H0 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.99□□□□□ -0.49
Urb1Q571H0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.99□□□□□ -0.49
Urb1Q571H0 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.99□□□□□ -0.49
Urb1Q571H0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.99□□□□□ -0.49
Urb1Q571H0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Urb1Q571H0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Urb1Q571H0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.99□□□□□ -0.49
Urb1Q571H0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Urb1Q571H0 Gm8885-201ENSMUST00000189382 598 ntBASIC11.99□□□□□ -0.49
Urb1Q571H0 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.99□□□□□ -0.49
Urb1Q571H0 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.99□□□□□ -0.49
Urb1Q571H0 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.99□□□□□ -0.49
Urb1Q571H0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.99□□□□□ -0.49
Urb1Q571H0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Urb1Q571H0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.99□□□□□ -0.49
Urb1Q571H0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Urb1Q571H0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Urb1Q571H0 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.98□□□□□ -0.49
Urb1Q571H0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Urb1Q571H0 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Urb1Q571H0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.98□□□□□ -0.49
Urb1Q571H0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Gm28450-201ENSMUST00000187349 638 ntBASIC11.98□□□□□ -0.49
Urb1Q571H0 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.98□□□□□ -0.49
Urb1Q571H0 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.98□□□□□ -0.49
Urb1Q571H0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.98□□□□□ -0.49
Urb1Q571H0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Urb1Q571H0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Gm9083-201ENSMUST00000120423 819 ntBASIC11.98□□□□□ -0.49
Urb1Q571H0 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.98□□□□□ -0.49
Urb1Q571H0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Urb1Q571H0 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.98□□□□□ -0.49
Urb1Q571H0 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.98□□□□□ -0.49
Urb1Q571H0 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.98□□□□□ -0.49
Urb1Q571H0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Urb1Q571H0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms