Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Gm24694-201ENSMUST00000180054 110 ntBASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Gm27663-201ENSMUST00000184839 110 ntBASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Gm24447-201ENSMUST00000083977 338 ntBASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc27Q3V036 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Gm14057-201ENSMUST00000120631 482 ntBASIC16.61■□□□□ 0.25
Ccdc27Q3V036 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Gm43094-201ENSMUST00000196549 921 ntBASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Gm5279-201ENSMUST00000199575 745 ntBASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc27Q3V036 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 AC166574.4-201ENSMUST00000227165 1937 ntBASIC16.6■□□□□ 0.25
Ccdc27Q3V036 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 Gm18636-201ENSMUST00000218846 1066 ntBASIC16.6■□□□□ 0.25
Ccdc27Q3V036 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 Gm5161-201ENSMUST00000075243 853 ntBASIC16.6■□□□□ 0.25
Ccdc27Q3V036 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc27Q3V036 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc27Q3V036 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Gm15678-201ENSMUST00000117573 960 ntBASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Gm15321-201ENSMUST00000121290 288 ntBASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.59■□□□□ 0.25
Ccdc27Q3V036 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms