Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Gm37922-201ENSMUST00000195596 455 ntBASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdkl5Q3UTQ8 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdkl5Q3UTQ8 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdkl5Q3UTQ8 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdkl5Q3UTQ8 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdkl5Q3UTQ8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdkl5Q3UTQ8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdkl5Q3UTQ8 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Gm11814-201ENSMUST00000119515 929 ntBASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdkl5Q3UTQ8 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.07■□□□□ 0
Cdkl5Q3UTQ8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Gm11803-201ENSMUST00000119966 444 ntBASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Gm24196-201ENSMUST00000179161 110 ntBASIC15.06■□□□□ 0
Cdkl5Q3UTQ8 Gm27486-201ENSMUST00000184923 80 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms