Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Gm3332-201ENSMUST00000189337 928 ntBASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Gm13286-201ENSMUST00000117750 537 ntBASIC11.89□□□□□ -0.51
Spg11Q3UHA3 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Gm35713-201ENSMUST00000210516 199 ntBASIC11.89□□□□□ -0.51
Spg11Q3UHA3 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.89□□□□□ -0.51
Spg11Q3UHA3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Mir6973a-201ENSMUST00000183646 78 ntBASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Gm15595-201ENSMUST00000120840 961 ntBASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Gm11246-201ENSMUST00000120880 345 ntBASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Gng5-ps-201ENSMUST00000120931 205 ntBASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Gm7985-201ENSMUST00000183329 981 ntBASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Olfr692-202ENSMUST00000217827 1126 ntBASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Spg11Q3UHA3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Gm14999-201ENSMUST00000121039 624 ntBASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Mir6941-201ENSMUST00000184711 59 ntBASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Gm36982-201ENSMUST00000193796 1128 ntBASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Gm43962-201ENSMUST00000203898 190 ntBASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Gm807-202ENSMUST00000224929 408 ntBASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.87□□□□□ -0.51
Spg11Q3UHA3 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.87□□□□□ -0.51
Spg11Q3UHA3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms