Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Gm4797-201ENSMUST00000219075 1283 ntBASIC15.25■□□□□ 0.03
Col5a2Q3U962 CT025551.1-201ENSMUST00000223996 692 ntBASIC15.25■□□□□ 0.03
Col5a2Q3U962 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col5a2Q3U962 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.25■□□□□ 0.03
Col5a2Q3U962 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col5a2Q3U962 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col5a2Q3U962 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col5a2Q3U962 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col5a2Q3U962 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col5a2Q3U962 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col5a2Q3U962 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col5a2Q3U962 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col5a2Q3U962 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.24■□□□□ 0.03
Col5a2Q3U962 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC15.24■□□□□ 0.03
Col5a2Q3U962 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col5a2Q3U962 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.24■□□□□ 0.03
Col5a2Q3U962 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col5a2Q3U962 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC15.24■□□□□ 0.03
Col5a2Q3U962 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col5a2Q3U962 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC15.24■□□□□ 0.03
Col5a2Q3U962 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col5a2Q3U962 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col5a2Q3U962 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC15.24■□□□□ 0.03
Col5a2Q3U962 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col5a2Q3U962 Mir339-201ENSMUST00000083659 96 ntBASIC15.24■□□□□ 0.03
Col5a2Q3U962 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col5a2Q3U962 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col5a2Q3U962 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.24■□□□□ 0.03
Col5a2Q3U962 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col5a2Q3U962 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.24■□□□□ 0.03
Col5a2Q3U962 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Gm12795-201ENSMUST00000117594 539 ntBASIC15.23■□□□□ 0.03
Col5a2Q3U962 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Gm5732-201ENSMUST00000182596 1007 ntBASIC15.23■□□□□ 0.03
Col5a2Q3U962 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Gm9230-201ENSMUST00000188228 532 ntBASIC15.23■□□□□ 0.03
Col5a2Q3U962 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Col5a2Q3U962 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC15.23■□□□□ 0.03
Col5a2Q3U962 AC099645.1-201ENSMUST00000226476 1105 ntBASIC15.23■□□□□ 0.03
Col5a2Q3U962 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col5a2Q3U962 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Gm13888-201ENSMUST00000119148 422 ntBASIC15.22■□□□□ 0.03
Col5a2Q3U962 Gm15881-201ENSMUST00000148792 942 ntBASIC15.22■□□□□ 0.03
Col5a2Q3U962 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC15.22■□□□□ 0.03
Col5a2Q3U962 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Gm21811-201ENSMUST00000096485 930 ntBASIC15.22■□□□□ 0.03
Col5a2Q3U962 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col5a2Q3U962 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms