Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cul4aQ3TCH7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cul4aQ3TCH7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Mir7023-201ENSMUST00000185093 64 ntBASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Gm44069-201ENSMUST00000204898 506 ntBASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Itm2b-204ENSMUST00000228637 783 ntBASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cul4aQ3TCH7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Mir7654-201ENSMUST00000185082 70 ntBASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms