Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm13192-201ENSMUST00000101199 208 ntBASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm10443-201ENSMUST00000119024 210 ntBASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm22379-201ENSMUST00000157480 131 ntBASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm20568-201ENSMUST00000197129 208 ntBASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm38102-201ENSMUST00000192791 1935 ntBASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm43721-201ENSMUST00000199677 2313 ntBASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm13142-201ENSMUST00000117213 1453 ntBASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Ush2AQ2QI47 AC174797.1-201ENSMUST00000224339 1649 ntBASIC6.68□□□□□ -1.34
Ush2AQ2QI47 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm6612-201ENSMUST00000170777 395 ntBASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Ighv4-2-201ENSMUST00000192975 362 ntBASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm5851-201ENSMUST00000194132 1204 ntBASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm12345-201ENSMUST00000119288 898 ntBASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm14942-201ENSMUST00000119642 336 ntBASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm6655-201ENSMUST00000201932 1309 ntBASIC6.67□□□□□ -1.34
Ush2AQ2QI47 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm43106-201ENSMUST00000199485 637 ntBASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm9487-201ENSMUST00000216600 472 ntBASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm7727-201ENSMUST00000219830 671 ntBASIC6.67□□□□□ -1.34
Ush2AQ2QI47 AC154213.1-201ENSMUST00000228234 583 ntBASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm6992-201ENSMUST00000217973 1607 ntBASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 AC115304.2-201ENSMUST00000226399 332 ntBASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC6.67□□□□□ -1.34
Ush2AQ2QI47 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm15625-201ENSMUST00000117617 1093 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm12418-201ENSMUST00000118116 942 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm16441-201ENSMUST00000138176 924 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms