Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Gm27838-201ENSMUST00000184829 128 ntBASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Gm17795-201ENSMUST00000214505 757 ntBASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ptchd3Q0EEE2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Gm14719-201ENSMUST00000121891 340 ntBASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Gm45841-201ENSMUST00000207700 164 ntBASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.57□□□□□ -0.4
Ptchd3Q0EEE2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Gm14057-201ENSMUST00000120631 482 ntBASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Mir7221-201ENSMUST00000184009 72 ntBASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Gm18905-201ENSMUST00000205454 928 ntBASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ptchd3Q0EEE2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms