Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Thbs3Q05895 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Thbs3Q05895 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.44□□□□□ -0.58
Thbs3Q05895 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Thbs3Q05895 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.44□□□□□ -0.58
Thbs3Q05895 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.44□□□□□ -0.58
Thbs3Q05895 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Mir686-201ENSMUST00000102174 109 ntBASIC11.44□□□□□ -0.58
Thbs3Q05895 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Gm12203-201ENSMUST00000118235 598 ntBASIC11.44□□□□□ -0.58
Thbs3Q05895 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.44□□□□□ -0.58
Thbs3Q05895 Gm12209-201ENSMUST00000120089 596 ntBASIC11.44□□□□□ -0.58
Thbs3Q05895 Gm13123-201ENSMUST00000122173 492 ntBASIC11.44□□□□□ -0.58
Thbs3Q05895 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Thbs3Q05895 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.44□□□□□ -0.58
Thbs3Q05895 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.44□□□□□ -0.58
Thbs3Q05895 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
Thbs3Q05895 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.44□□□□□ -0.58
Thbs3Q05895 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.44□□□□□ -0.58
Thbs3Q05895 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.44□□□□□ -0.58
Thbs3Q05895 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Thbs3Q05895 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Thbs3Q05895 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.44□□□□□ -0.58
Thbs3Q05895 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thbs3Q05895 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.44□□□□□ -0.58
Thbs3Q05895 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.43□□□□□ -0.58
Thbs3Q05895 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.43□□□□□ -0.58
Thbs3Q05895 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Thbs3Q05895 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Thbs3Q05895 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Thbs3Q05895 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Thbs3Q05895 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.43□□□□□ -0.58
Thbs3Q05895 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.43□□□□□ -0.58
Thbs3Q05895 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Thbs3Q05895 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Thbs3Q05895 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Gm24644-201ENSMUST00000157114 139 ntBASIC11.43□□□□□ -0.58
Thbs3Q05895 Gm22331-201ENSMUST00000158066 136 ntBASIC11.43□□□□□ -0.58
Thbs3Q05895 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.43□□□□□ -0.58
Thbs3Q05895 Gm37497-201ENSMUST00000195830 798 ntBASIC11.43□□□□□ -0.58
Thbs3Q05895 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.43□□□□□ -0.58
Thbs3Q05895 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Thbs3Q05895 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Thbs3Q05895 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Thbs3Q05895 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.43□□□□□ -0.58
Thbs3Q05895 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Thbs3Q05895 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Thbs3Q05895 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms