Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox9Q04887 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox9Q04887 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Sox9Q04887 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox9Q04887 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.42□□□□□ -0.26
Sox9Q04887 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.42□□□□□ -0.26
Sox9Q04887 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Sox9Q04887 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox9Q04887 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sox9Q04887 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.42□□□□□ -0.26
Sox9Q04887 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.42□□□□□ -0.26
Sox9Q04887 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.42□□□□□ -0.26
Sox9Q04887 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.42□□□□□ -0.26
Sox9Q04887 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.42□□□□□ -0.26
Sox9Q04887 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.42□□□□□ -0.26
Sox9Q04887 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.42□□□□□ -0.26
Sox9Q04887 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.42□□□□□ -0.26
Sox9Q04887 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.42□□□□□ -0.26
Sox9Q04887 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.42□□□□□ -0.26
Sox9Q04887 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.42□□□□□ -0.26
Sox9Q04887 Gzmn-202ENSMUST00000225535 989 ntBASIC13.42□□□□□ -0.26
Sox9Q04887 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Gm10312-201ENSMUST00000078515 489 ntBASIC13.42□□□□□ -0.26
Sox9Q04887 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Sox9Q04887 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Gm22058-201ENSMUST00000083393 310 ntBASIC13.42□□□□□ -0.26
Sox9Q04887 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Sox9Q04887 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sox9Q04887 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.42□□□□□ -0.26
Sox9Q04887 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sox9Q04887 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox9Q04887 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Sox9Q04887 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox9Q04887 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Sox9Q04887 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sox9Q04887 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.41□□□□□ -0.26
Sox9Q04887 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.41□□□□□ -0.26
Sox9Q04887 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Gm11978-201ENSMUST00000122315 466 ntBASIC13.41□□□□□ -0.26
Sox9Q04887 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.41□□□□□ -0.26
Sox9Q04887 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.41□□□□□ -0.26
Sox9Q04887 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sox9Q04887 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.41□□□□□ -0.26
Sox9Q04887 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.41□□□□□ -0.26
Sox9Q04887 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.41□□□□□ -0.26
Sox9Q04887 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.41□□□□□ -0.26
Sox9Q04887 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.41□□□□□ -0.26
Sox9Q04887 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sox9Q04887 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.41□□□□□ -0.26
Sox9Q04887 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox9Q04887 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms