Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Gm18222-201ENSMUST00000202416 1387 ntBASIC13□□□□□ -0.33
Col6a2Q02788 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC13□□□□□ -0.33
Col6a2Q02788 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col6a2Q02788 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13□□□□□ -0.33
Col6a2Q02788 Gm4768-201ENSMUST00000206199 686 ntBASIC13□□□□□ -0.33
Col6a2Q02788 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 AC022775.2-201ENSMUST00000227885 646 ntBASIC13□□□□□ -0.33
Col6a2Q02788 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Col6a2Q02788 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Col6a2Q02788 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Col6a2Q02788 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col6a2Q02788 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Col6a2Q02788 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col6a2Q02788 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Col6a2Q02788 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col6a2Q02788 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.99□□□□□ -0.33
Col6a2Q02788 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.99□□□□□ -0.33
Col6a2Q02788 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.99□□□□□ -0.33
Col6a2Q02788 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Col6a2Q02788 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.99□□□□□ -0.33
Col6a2Q02788 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Col6a2Q02788 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.99□□□□□ -0.33
Col6a2Q02788 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.99□□□□□ -0.33
Col6a2Q02788 Gm37042-201ENSMUST00000193816 581 ntBASIC12.99□□□□□ -0.33
Col6a2Q02788 Gm19931-201ENSMUST00000198920 368 ntBASIC12.99□□□□□ -0.33
Col6a2Q02788 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.99□□□□□ -0.33
Col6a2Q02788 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.99□□□□□ -0.33
Col6a2Q02788 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Col6a2Q02788 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.99□□□□□ -0.33
Col6a2Q02788 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Col6a2Q02788 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.99□□□□□ -0.33
Col6a2Q02788 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.99□□□□□ -0.33
Col6a2Q02788 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.99□□□□□ -0.33
Col6a2Q02788 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col6a2Q02788 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Col6a2Q02788 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Col6a2Q02788 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.98□□□□□ -0.33
Col6a2Q02788 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.98□□□□□ -0.33
Col6a2Q02788 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a2Q02788 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.98□□□□□ -0.33
Col6a2Q02788 Gm15198-201ENSMUST00000117283 177 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms