Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smn1P97801 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Smn1P97801 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Smn1P97801 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.16□□□□□ -0.62
Smn1P97801 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Smn1P97801 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Smn1P97801 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Smn1P97801 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.16□□□□□ -0.62
Smn1P97801 Gm14767-201ENSMUST00000121559 586 ntBASIC11.16□□□□□ -0.62
Smn1P97801 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.16□□□□□ -0.62
Smn1P97801 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Gm27321-201ENSMUST00000185021 205 ntBASIC11.16□□□□□ -0.62
Smn1P97801 Gm29608-201ENSMUST00000190444 463 ntBASIC11.16□□□□□ -0.62
Smn1P97801 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.16□□□□□ -0.62
Smn1P97801 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.16□□□□□ -0.62
Smn1P97801 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Smn1P97801 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.16□□□□□ -0.62
Smn1P97801 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.16□□□□□ -0.62
Smn1P97801 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Smn1P97801 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.16□□□□□ -0.62
Smn1P97801 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Smn1P97801 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Smn1P97801 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Smn1P97801 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Smn1P97801 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Smn1P97801 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Smn1P97801 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.16□□□□□ -0.62
Smn1P97801 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.16□□□□□ -0.62
Smn1P97801 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smn1P97801 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Smn1P97801 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.15□□□□□ -0.62
Smn1P97801 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Smn1P97801 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.15□□□□□ -0.62
Smn1P97801 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Smn1P97801 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Smn1P97801 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.15□□□□□ -0.62
Smn1P97801 Gm4875-201ENSMUST00000118257 786 ntBASIC11.15□□□□□ -0.62
Smn1P97801 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.15□□□□□ -0.62
Smn1P97801 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.15□□□□□ -0.62
Smn1P97801 Gm27680-201ENSMUST00000184192 160 ntBASIC11.15□□□□□ -0.62
Smn1P97801 Gm17837-201ENSMUST00000186435 985 ntBASIC11.15□□□□□ -0.62
Smn1P97801 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.15□□□□□ -0.62
Smn1P97801 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.15□□□□□ -0.62
Smn1P97801 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smn1P97801 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Smn1P97801 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.15□□□□□ -0.62
Smn1P97801 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Smn1P97801 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms