Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC18.08■□□□□ 0.48
Xrn1P97789 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Xrn1P97789 Gm4157-201ENSMUST00000211647 679 ntBASIC18.08■□□□□ 0.48
Xrn1P97789 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Xrn1P97789 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC18.08■□□□□ 0.48
Xrn1P97789 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Xrn1P97789 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Xrn1P97789 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Xrn1P97789 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.08■□□□□ 0.48
Xrn1P97789 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC18.08■□□□□ 0.48
Xrn1P97789 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Xrn1P97789 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Xrn1P97789 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Xrn1P97789 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Xrn1P97789 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Xrn1P97789 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Xrn1P97789 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Xrn1P97789 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Xrn1P97789 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrn1P97789 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Xrn1P97789 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrn1P97789 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrn1P97789 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC18.07■□□□□ 0.48
Xrn1P97789 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrn1P97789 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrn1P97789 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Xrn1P97789 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Xrn1P97789 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Xrn1P97789 Gm13809-201ENSMUST00000117921 597 ntBASIC18.07■□□□□ 0.48
Xrn1P97789 Gm12579-201ENSMUST00000118040 783 ntBASIC18.07■□□□□ 0.48
Xrn1P97789 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC18.07■□□□□ 0.48
Xrn1P97789 Gm6397-201ENSMUST00000161973 1069 ntBASIC18.07■□□□□ 0.48
Xrn1P97789 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Xrn1P97789 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Xrn1P97789 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Xrn1P97789 Gm7551-201ENSMUST00000089593 1074 ntBASIC18.07■□□□□ 0.48
Xrn1P97789 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrn1P97789 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrn1P97789 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrn1P97789 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Xrn1P97789 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrn1P97789 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Xrn1P97789 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrn1P97789 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrn1P97789 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Xrn1P97789 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Xrn1P97789 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Xrn1P97789 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Xrn1P97789 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC18.06■□□□□ 0.48
Xrn1P97789 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC18.06■□□□□ 0.48
Xrn1P97789 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Xrn1P97789 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC18.06■□□□□ 0.48
Xrn1P97789 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC18.06■□□□□ 0.48
Xrn1P97789 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Xrn1P97789 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Xrn1P97789 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Xrn1P97789 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Xrn1P97789 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Xrn1P97789 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Xrn1P97789 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Xrn1P97789 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Xrn1P97789 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Xrn1P97789 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Xrn1P97789 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Xrn1P97789 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC18.06■□□□□ 0.48
Xrn1P97789 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Xrn1P97789 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Xrn1P97789 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC18.06■□□□□ 0.48
Xrn1P97789 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC18.06■□□□□ 0.48
Xrn1P97789 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Xrn1P97789 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC18.06■□□□□ 0.48
Xrn1P97789 AC154290.1-201ENSMUST00000223786 1240 ntBASIC18.06■□□□□ 0.48
Xrn1P97789 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Xrn1P97789 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Xrn1P97789 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Xrn1P97789 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Xrn1P97789 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Xrn1P97789 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Xrn1P97789 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Xrn1P97789 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Xrn1P97789 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC18.05■□□□□ 0.48
Xrn1P97789 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC18.05■□□□□ 0.48
Xrn1P97789 Gm5733-201ENSMUST00000190232 939 ntBASIC18.05■□□□□ 0.48
Xrn1P97789 Gm43184-201ENSMUST00000197247 542 ntBASIC18.05■□□□□ 0.48
Xrn1P97789 CT485607.1-201ENSMUST00000216100 85 ntBASIC18.05■□□□□ 0.48
Xrn1P97789 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Xrn1P97789 Gm25517-201ENSMUST00000083865 134 ntBASIC18.05■□□□□ 0.48
Xrn1P97789 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Xrn1P97789 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Xrn1P97789 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Xrn1P97789 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Xrn1P97789 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Xrn1P97789 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Xrn1P97789 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC18.05■□□□□ 0.48
Xrn1P97789 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Xrn1P97789 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Xrn1P97789 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Xrn1P97789 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Xrn1P97789 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Xrn1P97789 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms